Package: survSNP 0.26
Alexander Sibley
survSNP: Power Calculations for SNP Studies with Censored Outcomes
Conduct asymptotic and empirical power and sample size calculations for Single-Nucleotide Polymorphism (SNP) association studies with right censored time to event outcomes.
Authors:
survSNP_0.26.tar.gz
survSNP_0.26.zip(r-4.7-x86_64)survSNP_0.26.zip(r-4.7-arm64)survSNP_0.26.zip(r-4.6-x86_64)survSNP_0.26.zip(r-4.6-arm64)survSNP_0.26.zip(r-4.5-x86_64)
survSNP_0.26.tgz(r-4.6-x86_64)survSNP_0.26.tgz(r-4.6-arm64)survSNP_0.26.tgz(r-4.5-x86_64)survSNP_0.26.tgz(r-4.5-arm64)
survSNP_0.26.tar.gz(r-4.7-arm64)survSNP_0.26.tar.gz(r-4.7-x86_64)survSNP_0.26.tar.gz(r-4.6-arm64)survSNP_0.26.tar.gz(r-4.6-x86_64)
survSNP_0.26.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
survSNP/json (API)
| # Install 'survSNP' in R: |
| install.packages('survSNP', repos = c('https://dcibioinformatics.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:4b869b09f2. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 133 | ||
| linux-devel-x86_64 | OK | 163 | ||
| source / vignettes | OK | 258 | ||
| linux-release-arm64 | OK | 236 | ||
| linux-release-x86_64 | OK | 156 | ||
| macos-release-arm64 | OK | 145 | ||
| macos-release-x86_64 | OK | 362 | ||
| macos-oldrel-arm64 | OK | 119 | ||
| macos-oldrel-x86_64 | OK | 378 | ||
| windows-devel-arm64 | OK | 346 | ||
| windows-devel-x86_64 | OK | 312 | ||
| windows-release-arm64 | OK | 340 | ||
| windows-release-x86_64 | OK | 149 | ||
| windows-oldrel-x86_64 | OK | 152 | ||
| wasm-release | OK | 179 |
Exports:asypowcensbndhwesim.snp.expsurv.powersim.snp.expsurv.sctestsurv.exp.gt.modelsurvSNP.power.table
Dependencies:codetoolsforeachiteratorslatticeMatrixRcppsurvivalxtable
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Power Calculations for SNP Studies with Censored Outcomes | survSNP-package survSNP |
| Calculating the asymptotic power and variance | asypow |
| Calculate bound for censoring distribution. | censbnd |
| Relative genotypic frequencies under HWE | hwe |
| Asymptotic and Empirical Power | sim.snp.expsurv.power |
| Simulation of Cox Score Statistic | sim.snp.expsurv.sctest |
| Exponential Hazard Rates for a Genetic Risk Model | surv.exp.gt.model |
| Table for Asymptotic and Empirical Power | survSNP.power.table |